NEWS

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isoformic 0.1.2

Features

• New tx_type_palette().

Bug Fixes

• In make_tx_to_gene() output, wrong column name entrez_id replaced for tx_length.

isoformic 0.1.1

Reference and Annotation

• download_reference(): now supports organism = c("human", "mouse"), with organism = "human" being the default.
• download_reference(): argument file_type = "gtf" is the default.
• prepare_annotation(): Parse both GTF and GFF file formats into required annotation data.

Bug Fixes

• prepare_profile_data(): accepts matrix and data.frame as input for the txi_transcript argument.

isoformic 0.1.0

• Release of the initial workflow.